{"id":295,"date":"2014-10-06T10:11:15","date_gmt":"2014-10-06T08:11:15","guid":{"rendered":"http:\/\/wordpress.callac.online\/index.php\/test-du-chi2-et-test-de-fisher\/"},"modified":"2023-10-14T20:14:39","modified_gmt":"2023-10-14T18:14:39","slug":"test-du-chi2-et-test-de-fisher","status":"publish","type":"page","link":"https:\/\/wordpress.callac.online\/index.php\/logiciels-mathematiques\/le-logiciel-r\/les-tests-avec-r\/test-du-chi2-et-test-de-fisher\/","title":{"rendered":"Test du Chi2 et test de Fisher"},"content":{"rendered":"<h2>Un fichier de donn\u00e9es<\/h2>\n<p>Travaillons sur une enqu\u00eate de satisfactions dans un h\u00f4pital, r\u00e9cup\u00e9r\u00e9 lors d&rsquo;un cours de FUN (France Unit\u00e9 Num\u00e9rique). Les fichiers sont disponibles <a href=\"https:\/\/filedn.com\/lpKG7uY9hIHVel5exA5Ik80\/Wordpress\/Logiciels%20math%C3%A9matiques\/R\/\">ici<\/a>.<\/p>\n<p>Par la suite, ces donn\u00e9es seront stock\u00e9es dans la variable <em>satis<\/em> .<\/p>\n<p>Dans ces donn\u00e9es comme souvent, les observations sont en lignes et les variables en colonnes.<\/p>\n<h2>Pr\u00e9sentation<\/h2>\n<table>\n<tbody>\n<tr class=\"row_even\">\n<td><\/td>\n<td>$B$<\/td>\n<td>$\\overline<em>B<\/em>$<\/td>\n<\/tr>\n<tr class=\"row_odd\">\n<td>$A$<\/td>\n<td>$a$<\/td>\n<td>$b$<\/td>\n<\/tr>\n<tr class=\"row_even\">\n<td>$\\overline<em>A<\/em>$<\/td>\n<td>$c$<\/td>\n<td>$d$<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>Dans le tableau pr\u00e9c\u00e9dent, on cherche \u00e0 savoir si le facteur $B$ influe sur le param\u00e8tre $A$.<\/p>\n<h2>Un exemple<\/h2>\n<p>Cherchons si le sexe des personnes a un r\u00f4le dans le fait de recommander l&rsquo;\u00e9tablissement.<\/p>\n<p>Commen\u00e7ons par pr\u00e9parer les variables.<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">satis$recommander.b&lt;-ifelse(satis$recommander==2,1,0)<\/pre>\n<p>On peut alors donner la r\u00e9partition dans un tableau \u00e0 double entr\u00e9e :<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">tab&lt;-table(satis$recommander.b,satis$sexe,deparse.level=2) \ntab<\/pre>\n<p><code><br \/>\nsatis$sexe<br \/>\nsatis$recommander.b   0   1<br \/>\n0  73  63<br \/>\n1 139 130<br \/>\n<\/code><\/p>\n<p>Pour obtenir les pourcentages, utilisons l&rsquo;instrucion <em>prop.table<\/em>.<\/p>\n<p>Par d\u00e9faut, elle donne les pourcentages par rapport \u00e1 l&rsquo;effectif total :<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">prop.table(tab)<\/pre>\n<p><code><br \/>\nsatis$sexe<br \/>\nsatis$recommander.b         0         1<br \/>\n0 0.1802469 0.1555556<br \/>\n1 0.3432099 0.3209877<br \/>\n<\/code><\/p>\n<p>Pour avoir les pourcentages par rapport au total de chaque ligne, on rajoutera <em>margin=1<\/em>, ou <em>margin=2<\/em> pour le total en colonnes.<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">prop.table(tab,margin=1)<\/pre>\n<p><code><br \/>\nsatis$sexe<br \/>\nsatis$recommander.b         0         1<br \/>\n0 0.5367647 0.4632353<br \/>\n1 0.5167286 0.4832714<br \/>\n<\/code><\/p>\n<p>On constate un \u00e9cart entre les deux r\u00e9partitions : l\u00e9g\u00e8rement plus d&rsquo;hommes (0) recommandent l&rsquo;\u00e9tablissement. Mais est-ce significatif ?<\/p>\n<h2>Test de Chi2 ou test de fisher ?<\/h2>\n<p>Par d\u00e9faut, on utilisera le test du Chi2. Mais il faut que les deux conditions suivantes soient respect\u00e9es :<\/p>\n<p>&#8211; des effectifs pas trop petits ;<br \/>\n&#8211; des pourcentages pas trop extr\u00eames.<\/p>\n<p>Si ces conditions ne sont pas respect\u00e9es, ce que nous dira le test du Chi2, on utilisera le test de Fisher.<\/p>\n<h2>Les tests avec R<\/h2>\n<p>Pour le test du Chi2 :<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">chisq.test(satis$recommander.b,satis$sexe,correct=FALSE)<\/pre>\n<p><code><br \/>\nPearson's Chi-squared test<\/code><\/p>\n<p><code><br \/>\n<\/code><\/p>\n<p><code>data:  satis$recommander.b and satis$sexe<br \/>\nX-squared = 0.1454, df = 1, p-value = 0.703<br \/>\n<\/code><\/p>\n<p>Pour le test de Fisher :<\/p>\n<pre class=\"EnlighterJSRAW\" data-enlighter-language=\"generic\">fisher.test(satis$recommander.b,satis$sexe)<\/pre>\n<p><code><br \/>\nFisher's Exact Test for Count Data<\/code><\/p>\n<p><code><br \/>\n<\/code><\/p>\n<p><code>data:  satis$recommander.b and satis$sexe<br \/>\np-value = 0.7523<br \/>\nalternative hypothesis: true odds ratio is not equal to 1<br \/>\n95 percent confidence interval:<br \/>\n0.7020996 1.6745388<br \/>\nsample estimates:<br \/>\nodds ratio<br \/>\n1.083487<br \/>\n<\/code><\/p>\n<p>Dans les deux cas, on constate que la <em>p-value<\/em> est trop \u00e9lev\u00e9e (sup\u00e9rieure \u00e0 $5~\\%$.)<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Un fichier de donn\u00e9es Travaillons sur une enqu\u00eate de satisfactions dans un h\u00f4pital, r\u00e9cup\u00e9r\u00e9 lors d&rsquo;un cours de FUN (France Unit\u00e9 Num\u00e9rique). Les fichiers sont disponibles ici. Par la suite,&hellip;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":2089,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-295","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.1.1 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Test du Chi2 et test de Fisher - Maths &amp; Num\u00e9rique<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/wordpress.callac.online\/index.php\/logiciels-mathematiques\/le-logiciel-r\/les-tests-avec-r\/test-du-chi2-et-test-de-fisher\/\" \/>\n<meta property=\"og:locale\" content=\"fr_FR\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Test du Chi2 et test de Fisher - Maths &amp; Num\u00e9rique\" \/>\n<meta property=\"og:description\" content=\"Un fichier de donn\u00e9es Travaillons sur une enqu\u00eate de satisfactions dans un h\u00f4pital, r\u00e9cup\u00e9r\u00e9 lors d&rsquo;un cours de FUN (France Unit\u00e9 Num\u00e9rique). 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